fix: flip symlink structure - AGENTS.md is the real file
AGENTS.md is now the canonical instruction file, with CLAUDE.md, .cursorrules, and .github/copilot-instructions.md as symlinks to it. This is simpler and more intuitive - the main file is at the root, not buried in .github/. Updated all references across agents, commands, skills, and .memory/.
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@@ -58,8 +58,8 @@ Report what was added/updated and where.
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## Step 6: Update instruction file if project knowledge changed
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If `.memory/knowledge.md` was **materially** updated (architecture, conventions,
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commands — not just plans/research), update `.github/copilot-instructions.md` to
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reflect the changes. The symlinks automatically propagate to all tools.
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commands — not just plans/research), update `AGENTS.md` to reflect the changes.
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The symlinks automatically propagate to all tools.
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If updates were only plans/research/tracking details, skip this step.
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